•  
  •  
 

Bulletin of Chinese Academy of Sciences (Chinese Version)

Keywords

rice; cereal crops; complex traits; molecular modules; molecular module-based designer breeding

Document Type

Article

Abstract

Cultivation of cereal crops including rice, started in China over 8000 years ago, and Chinese knowledge of crop breeding has great impact on cereal production of the whole world. As of the early 1990s, scientists from Chinese Academy of Sciences(CAS), representing China as one of the sponsor countries, joined the International Rice Genome Project and were in charge of sequencing Chromosome 4 of "geng" rice and the whole genome of "xian" rice 93-11, which marked the beginning of the serial efforts from Chinese plant science community to develop rice into a model crop/plant to study genomic and molecular basis underlying complex traits. As a grand effort to translate and assemble the knowledge and know-hows gained from the basic research into crop breeding, CAS launched a national programme called the Innovation System of Designer Breeding by Molecular Modules five years ago. The programme used rice as a model crop to dissect molecular modules controlling complex traits including yield, yield stability, grain quality, and crop nutrient use efficiency, study the coupling and interactions of the molecular modules, and develop molecular module-based designer breeding systems. The programme also aimed to set rice as a reference to promote the study of complex traits and designer breeding of other related crops and animals such as wheat, soybean, and fish. Through collaborative researches and coherent team work, the programme has built up shared national rice germplasm libraries and genomic databases, dissected a series of molecular modules applicable in designer breeding, and established theoretic framework for simultaneous improvement of both yield and quality traits, cold perception and resistance, balance between broad spectrum durable disease resistance and yield, nitrogen use efficiency, as well as heterosis of yield traits. Such achievements further experimentally validated the concept of Designer Breeding by Molecular Modules. The importance of these achievements were highlighted by the winning of the top ten advances of Chinese Life Sciences in 2015 and 2017, the top ten advances of Chinese Sciences in 2016, and the First Prize of National Natural Science Award in 2017, respectively.

First page

900

Last Page

908

Language

Chinese

Publisher

Bulletin of Chinese Academy of Sciences

References

Editorial. A Chinese renaissance. Nature Plants, 2017, 3:17006.

Wang S K, Wu K, Yuan Q B, et al. Control of grain size, shape and quality by OsSPL16 in rice. Nature Genetics, 2012, 44:950-954.

Wang S K, Li S, Liu Q, et al. The OsSPL16- GW7 regulatory module determines grain shape and simultaneously improves rice yield and grain quality. Nature Genetics, 2015, 47:949-954.

Si L, Chen J, Huang X, et al. OsSPL13 controls grain size in cultivated rice. Nature Genetics, 2016, 48:447-56.

Ma Y, Dai X, Xu Y, et al. COLD1 confers chilling tolerance in rice. Cell, 2015, 160:1209-1221.

Deng Y, Zhai K, Xie Z H, et al. Epigenetic regulation of antagonistic receptors confers rice blast resistance with yield balance. Science, 2017, 355:962-965.

Hu B, Wang W, Ou S, et al. Variation in NRT1.1B contributes to nitrate-use divergence between rice subspecies. Nature Genetics, 2015, 47:834-838.

Huang X, Yang S, Gong J, et al. Genomic architecture of heterosis for yield traits in rice. Nature, 2016, 537:629-633.

Fan C C, Xing Y Z, Mao H L, et al. GS3, a major QTL for grain length and weight and minor QTL for grain width and thickness in rice, encodes a putative transmembrane protein. Theoretical and Applied Genetics, 2006, 112:1164-1171.

Xue W Y, Xing Y Z, Weng X Y, et al. Natural variation in Ghd7 is an important regulator of heading date and yield potential in rice. Nature Genetics, 2008, 40:761-767.

Huang X Z, Qian Q, Liu Z B, et al. Natural variation at the DEP1 locus enhances grain yield in rice. Nature Genetics, 2009, 41:494-497.

Jiao Y Q, Wang Y H, Xue D W, et al. Regulation of OsSPL14 by OsmiR156 defines ideal plant architecture in rice. Nature Genetics, 2010, 42:541-544.

Liu Q, Han R X, Wu K, et al. G-protein βγ subunits determine grain size through interaction with MADS-domain transcription factors in rice. Nature Communications, 2018, 9:852.

Zhang Z, Li J, Pan Y, et al. Natural variation in CTB4a enhances rice adaptation to cold habitats. Nature Communications, 2017, 8:14788.

Dean R, Van Kan J A, Pretorius Z A, et al. The top 10 fungal pathogens in molecular plant pathology. Molecular Plant Pathology, 2012, 13(7):804.

Dang J L, Horvath D M, Staskawicz B J. Pivoting the plant immune system from dissection to deployment. Science, 2013, 341:746-751.

Deng Y, Zhu X, Shen Y, et al. Genetic characterization and fine mapping of the blast resistance locus Pigm(t) tightly linked to Pi2 and Pi9 in a broad-spectrum resistant Chinese variety. Theoretical and Applied Genetics, 2006, 113:705-713.

Wang G L, Valent B. Durable resistance to rice blast. Science, 2017, 355:906-907.

Nelson R, Wiesner-Hanks T, Wisser R, et al. Navigating complexity to breed disease-resistant crops. Nature Reviews Genetics, 2017, 19:21.

王威, 张联合, 李华, 等.水稻营养元素吸收转运的分子机制研究进展.中国科学:生命科学, 2015, 45:569-590.

Wang W, Hu B, Yuan D, et al. Expression of the nitrate transporter gene OsNRT1.1A/ OsNPF6.3 confers high yield and early maturation in rice. Plant Cell, 2018, 30:638-651.

Wang Q, Nian J, Xie X, et al. Genetic variations in ARE1 mediate grain yield by modulating nitrogen utilization in rice. Nature Communications, 2018, 9:735.

Chao D Y, Lin H X. Nitrogen-use efficiency:Transport solution in rice variations. Nature Plants, 2015, 1:15096.

Huang X, Yang S, Gong J, et al. Genomic analysis of hybrid rice varieties reveals numerous superior alleles that contribute to heterosis. Nature Communications, 2012, 6:6258.

薛勇彪, 种康, 韩斌, 等.开启中国设计育种新篇章——"分子模块设计育种创新体系"战略性先导科技专项及进展.中国科学院院刊, 2015, 30(3):308-314.

Share

COinS